Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855940.1_cds_XP_016512979.1_25564
CDS Infomation

[gene=LOC107830020] [db_xref=GeneID:107830020] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2] [protein_id=XP_016512979.1] [location=complement(join(15756..16690,16787..17047,17138..17173,25288..26071))] [gbkey=CDS]
Sequence

ATGTTTCAAATTCAATCTCTATCCTTCTTCTTCTCGTCTCTTCTTCTTCTTCTTCCTCTG
TTTTCCTCAGTGAAATCCAGTGCAAATGATGATGCTCCGTCTAATACATATTGTCCAAAA
CATAACTGCAATGGAGTTGAAGTTTCATATCCTTTCTGGAGGCTTGATAATTATAACGCA
ACTGCTCCTCAGTACTGTGGTTACCCTGGATTTGGCATCAACTGTTCCGTTTCTCATTCT
CAACCATATCCTATTCTTCACCTTCCGGGAGATGCTTTCTACGTTAAAAATATAGATTAT
GAAACCAATTCTCTCACTCTAGTGGACATTGATGTTTTCGACGTGCCATGTCCCAGAGCA
CGTCACAATCTTACTTTAGAGCACTTGCCGTTGGATTATTCGAATTCCGATCTGAAACTT
ACATTTTATTTCAATTGTACAAAATCTATACCTCAAGCTTATCCCGCGGAGTGCTTAATA
AAACCAGGTGGAAAAGCATCTTATTTCTATGTTGGGGAAATTAGCGAGCCGGAAGATTTG
GCCTGGTTTGGGATTTGTGAGGAGAAAGTGGTGGCGGCGGTGACGGAGAGGGGAAGCTTT
CAGAACAATGATTGGATCGGAGGATTTGGTGGGGCCATGGGCGAGGGTTTCGTGCTGGAC
TGGCGGAGCTCGTCGGAGTGCGGCAAGTGTGAGGACTCACACGGGCGGTGTGGTTTCAAC
AATTCAACCCAGGATCTCTTGTGTTTTTGCAAAGATGGTACCGTTAAGTTTGATCATTGC
AAAGGCAATAAAAGAGATATCAGAGTGAAGGCTGTCGTAGGTGCAAGTGCAGTTGCATTA
ACTGCCTTTGTGGCATGTGTAATTTTCTTTCTCTATCGTCGTCGACAGAAGAAAAGTGAC
GCTGGTTCGTCTTTGATCTCCAGTAGCATCCTTTCTTATCCCTCCTCAATAACGGACCCT
GAAAAGGCTTCACACTATTTCGGAATTCACGTATTTGACTACAATGAACTGCAAGAAGCC
ACAAGCAATTTTGATTCCAACAAAGAGCTAGGAGAAGGTGGCTTTGGCACAGTATACAAA
GGTAAACTTCGAGATGGACGTGTTGTTGCTGTAAAACGTTTATATGAGAACAACTACAAG
AGAGTTGAGCAATTCCGTAATGAAGTTGAACTCCTCACACGCCTGCACCATCGAAATCTA
GTTACCCTTTACGGATGCACATCTCGCCATAGCCGCGAGCTTCTTCTTGTGTATGAATAT
ATTCCCAATGGCACAGTTGCTGATCATCTTCATGGAGAACACACTAAGCCTGGATCGCTT
TCATGGAATACACGAATGAGCATTGCCGTAGAAACGGCAAGTGCACTAACATATCTCCAC
AATTCAGATGTCATTCACAGAGATGTAAAAACTGACAATATCCTCCTAGACAATAATTTC
TGCGTCAAAGTAGCAGATTTTGGCTTGTCTAGGCTTTTCCCAACTGATGCTACTCACGTG
TCAACAGCTCCACAGGGTACCCCTGGATATGTTGATCCCCAGTATCACGAATGCTATCAA
CTTACCGGTAAAAGTGATGTTTATAGTTTCGGGGTAGTACTAATCGAGCTTATATCCTCC
CTACCAGCTGTTGATATCTCTAGGCATCGATACGAAATAAATCTGTCAAATATGGCTATT
AACAAGATTCAGAGCAATGCATTACATGAGTTGGTTGATCCAAGTCTTGGTTTTGATTCC
AATGAGAAGGTAAAGTTGATGATCACCGCCATGGCAGAATTGGCTTTCCAGTGTTTACAG
AATGACAGAGATTTGAGACCATCCATGCAAGATGTTTTGAAGGCTCTTCTGGGAATTCAG
AGTATGGATAAAACTACAGGAGCAACAGAGAAGGAAAGTCCTGGCGATGATGTTGGCTTG
TTGAAGAATAATATATTATCTCTCTCACCTGATTCAGTTATTGCAAAATGGACTAGCAGT
AGCACGTCAACAACATCTATTTCCAGTACTGGCTAA

Peptide Sequence

PEP ID

XP_016512979.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 [Nicotiana tabacum]
Sequence

MFQIQSLSFFFSSLLLLLPLFSSVKSSANDDAPSNTYCPKHNCNGVEVSYPFWRLDNYNA
TAPQYCGYPGFGINCSVSHSQPYPILHLPGDAFYVKNIDYETNSLTLVDIDVFDVPCPRA
RHNLTLEHLPLDYSNSDLKLTFYFNCTKSIPQAYPAECLIKPGGKASYFYVGEISEPEDL
AWFGICEEKVVAAVTERGSFQNNDWIGGFGGAMGEGFVLDWRSSSECGKCEDSHGRCGFN
NSTQDLLCFCKDGTVKFDHCKGNKRDIRVKAVVGASAVALTAFVACVIFFLYRRRQKKSD
AGSSLISSSILSYPSSITDPEKASHYFGIHVFDYNELQEATSNFDSNKELGEGGFGTVYK
GKLRDGRVVAVKRLYENNYKRVEQFRNEVELLTRLHHRNLVTLYGCTSRHSRELLLVYEY
IPNGTVADHLHGEHTKPGSLSWNTRMSIAVETASALTYLHNSDVIHRDVKTDNILLDNNF
CVKVADFGLSRLFPTDATHVSTAPQGTPGYVDPQYHECYQLTGKSDVYSFGVVLIELISS
LPAVDISRHRYEINLSNMAINKIQSNALHELVDPSLGFDSNEKVKLMITAMAELAFQCLQ
NDRDLRPSMQDVLKALLGIQSMDKTTGATEKESPGDDVGLLKNNILSLSPDSVIAKWTSS
STSTTSISSTG

Transcript Sequence

Gene sequence data has not been registered.